PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G32600.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family TCP
Protein Properties Length: 321aa    MW: 33930.4 Da    PI: 8.2779
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G32600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP157.95.8e-49452071136
              TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..... 88 
                      aa++kdrhski+T++g+RdRR+Rls+++a++fF+Lqd+LGfdk+skt++WLl+++k+ai e++++  +++s c e++sss s++ ++++     
  ONIVA03G32600.1  45 AAARKDRHSKISTAGGMRDRRMRLSLDVARKFFALQDMLGFDKASKTVQWLLNMSKAAIREIMSD--DASSVCeEDGSSSLSVDGKQQQhsnpa 136
                      589**************************************************************..666678877777777764444445678 PP

              TCP  89 .......................kaaksaakskksqksaasalnlakesrakarararertrekmriknkl 136
                                             k +++aa++k++++ a+++  ++kesrakar+rarert+ek+r+++++
  ONIVA03G32600.1 137 drgggagdhkgaahghsdgkkpaKPRRAAANPKPPRRLANAHPVPDKESRAKARERARERTKEKNRMRWVT 207
                      8899999999999*********77777777**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MHPFMDLELE PHGQQLAAAA EDGAGGQGVD AGVPFGVDGA AAAAAAARKD RHSKISTAGG  60
MRDRRMRLSL DVARKFFALQ DMLGFDKASK TVQWLLNMSK AAIREIMSDD ASSVCEEDGS  120
SSLSVDGKQQ QHSNPADRGG GAGDHKGAAH GHSDGKKPAK PRRAAANPKP PRRLANAHPV  180
PDKESRAKAR ERARERTKEK NRMRWVTLAS AISVEAATAA AAAGEDKSPT SPSNNLNHSS  240
STNLVSTELE DGSSSTRHNG VGVSGGRMQE ISAASEASDV IMAFANGGAY GDSGSYYLQQ  300
QHQQDQWELG GVVYANSRHY C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.14e-23TCP family protein