PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G32760.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

GeBP

Protein Properties

Length: 372aa MW: 39855.6 Da PI: 7.0732

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G32760.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	87.5	1.7e-27	84	178	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 +fqr+wse+De+ +LqGl+ + +g d++ fy+ +++s+ + +++sql+eK+rrLK+Kf+++++++++g +p+ ++hd+++++l++++ ONIVA03G32760.1 84 KFQRIWSESDELRFLQGLLGC-GAQGLVFPRDLNVFYDRFSESMPSPYTRSQLSEKLRRLKNKFRGMSTRVARGLDPARLAPHDRDVLHLCSRL 176 79*****************.556878888************************************************************* PP DUF573 96 Wg 97 W+ ONIVA03G32760.1 177 WD 178 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MASDQTLPVP VSVELPPAAP NPPDPTAPLL PHADDPSAPP AAARKLPVKR RSPPPRPSSP 60 SSSDPASSDP AAKQQPQQPP PPFKFQRIWS ESDELRFLQG LLGCGAQGLV FPRDLNVFYD 120 RFSESMPSPY TRSQLSEKLR RLKNKFRGMS TRVARGLDPA RLAPHDRDVL HLCSRLWDPA 180 NAATSPFAAA GDASSGNKRR RAAPRAGPLM PPDPSGDSNS HDYNGGISAG TPGAFGDGHG 240 GEEMMYLEQE SGHFGYHGDV AIAADGSLDG IVKVQPETLP ALPSIGDIAV HSENGNGKAV 300 VPRSNEHHMA NAVLDIFEEC LREVKANGIT YGANVNGGTE LARRWRAQRI DELDVLSRRL 360 RLLVEDAAAA GR

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MASDQTLPVP VSVELPPAAP NPPDPTAPLL PHADDPSAPP AAARKLPVKR RSPPPRPSSP  60
SSSDPASSDP AAKQQPQQPP PPFKFQRIWS ESDELRFLQG LLGCGAQGLV FPRDLNVFYD  120
RFSESMPSPY TRSQLSEKLR RLKNKFRGMS TRVARGLDPA RLAPHDRDVL HLCSRLWDPA  180
NAATSPFAAA GDASSGNKRR RAAPRAGPLM PPDPSGDSNS HDYNGGISAG TPGAFGDGHG  240
GEEMMYLEQE SGHFGYHGDV AIAADGSLDG IVKVQPETLP ALPSIGDIAV HSENGNGKAV  300
VPRSNEHHMA NAVLDIFEEC LREVKANGIT YGANVNGGTE LARRWRAQRI DELDVLSRRL  360
RLLVEDAAAA GR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	2e-09	GeBP family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G32760.1