PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G33590.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ZF-HD
Protein Properties Length: 238aa    MW: 24295 Da    PI: 8.0118
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G33590.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer86.33.3e-271060457
      ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                      +Y+eC++NhAa+lG++a DGC+E++p+   +g++a+l CaACgCHRnFHR++ 
  ONIVA03G33590.1 10 EVYRECMRNHAAKLGTYANDGCCEYTPD---DGHPAGLLCAACGCHRNFHRKDF 60
                     68*************************8...789******************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MEQQQERPRE VYRECMRNHA AKLGTYANDG CCEYTPDDGH PAGLLCAACG CHRNFHRKDF  60
LDGRATAAAG GAGGAGVGVA PMLPAPGGGG PPGYMHMAAM GGAVGGGGGV DGGGGSGGRR  120
RTRTKFTEEQ KARMLRFAER LGWRMPKREP GRAPGDDEVA RFCREIGVNR QVFKVWMHNH  180
KAGGGGGGGG SGGPGAGGGA QTSSSTTRGG GDVGVGLSPA MGGDGEDDEE VRGSEMCM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-32ZF-HD family protein