PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G34090.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 356aa MW: 37934.7 Da PI: 5.7583

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G34090.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.9	1.6e-12	177	224	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h +Er+RR+++ ++f L +++P + kK++Ka++L A++Y+k+Lq ONIVA03G34090.1 177 QEHILAERKRREKLSQRFIALSKIVPGL-----KKMDKASVLGDAIKYVKQLQ 224 67999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MATQWFSNMV MDEPSFFHQW QSDGLLEQYT EQQIAVAFGQ AGEADAAAAA AATMVQQQQY 60 AAAEHRPRKA AKVNTSWDSC ITEQGSPADS SSPTILSFGG HADAAAAAAF ASAGQAQSAP 120 YYGGASAAAL KPKQELDAAA APFSQARPVK RSYDAMVAAD VAKAPAAAAS RPASQNQEHI 180 LAERKRREKL SQRFIALSKI VPGLKKMDKA SVLGDAIKYV KQLQDQVKGL EEEARRRPVE 240 AAVLVKKSQL SADDDDGSSC DENFDGGEAT AGLPEIEARV SERTVLVKIH CENRKGALIT 300 ALSEVETIGL TIMNTNVLPF TSSSLDITIM ATAGENFSLS VKDIVKKLNQ AFKLSL

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MATQWFSNMV MDEPSFFHQW QSDGLLEQYT EQQIAVAFGQ AGEADAAAAA AATMVQQQQY  60
AAAEHRPRKA AKVNTSWDSC ITEQGSPADS SSPTILSFGG HADAAAAAAF ASAGQAQSAP  120
YYGGASAAAL KPKQELDAAA APFSQARPVK RSYDAMVAAD VAKAPAAAAS RPASQNQEHI  180
LAERKRREKL SQRFIALSKI VPGLKKMDKA SVLGDAIKYV KQLQDQVKGL EEEARRRPVE  240
AAVLVKKSQL SADDDDGSSC DENFDGGEAT AGLPEIEARV SERTVLVKIH CENRKGALIT  300
ALSEVETIGL TIMNTNVLPF TSSSLDITIM ATAGENFSLS VKDIVKKLNQ AFKLSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	183	188	ERKRRE
2	184	189	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22750.2	1e-46	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G34090.1