PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G34330.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 348aa    MW: 38583.2 Da    PI: 6.1071
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G34330.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.5e-10172220355
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  ONIVA03G34330.1 172 NSHSLAERLRRKKISERMKLLQDLVPGC----SKITGKAVMLDEIINYVQSLQ 220
                      58**************************....899*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MRTGTRGSCD LAVREQGKIG QQSDQCPGPN SGKEFLEVNW DSVALHQKMG YNSGAFGFQA  60
YPMVLEDREG LYRSPNGTFC QNIQLSDDHS SGAKRRKGID DHIALLNPSA SSRIQNVGDQ  120
QTEVSSQQER ISMEEDNQKS CSKMQSKEDS SDGDGTKEDY VHVRAKRGQA TNSHSLAERL  180
RRKKISERMK LLQDLVPGCS KITGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPELSFD  240
IEQILSKQMM LSQDRHLAFY GVDPGSSALV AHFNQGIMQP EMLCNVSNPA DVLQGTTIQD  300
ISTVNQIPAM WEGLQNIPHL NYNPGGAMAE GSTNNSGIYD PKFVKNYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.13e-54bHLH family protein