PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G35150.3
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HSF
Protein Properties Length: 366aa    MW: 39974.6 Da    PI: 4.6161
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G35150.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind88.87e-28501362101
                      HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS
     HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 
                      Fl k+ye++ed+ ++++isw   gnsfvv+d + fa  +Lp+yFkhsnf+SFvRQLn+Y    v+ ++         weF+++ F +gkkell+
  ONIVA03G35150.3  50 FLCKTYEVVEDPGTDTVISWGFAGNSFVVWDANAFAAVLLPRYFKHSNFSSFVRQLNTY----VDPDR---------WEFANEGFLRGKKELLK 130
                      9**********************************************************....55555.........***************** PP

                      XXXXXX CS
     HSF_DNA-bind  96 kikrkk 101
                      +ikr++
  ONIVA03G35150.3 131 TIKRRR 136
                      ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MNPLRVIVKE EELDFAAAAA GEGSPSSWAV GVMDLPRPME GLGEAGPPPF LCKTYEVVED  60
PGTDTVISWG FAGNSFVVWD ANAFAAVLLP RYFKHSNFSS FVRQLNTYVD PDRWEFANEG  120
FLRGKKELLK TIKRRRPPPS SPPSSSSSSS SSQHQQQPAA ACLEVGQFGR DGVVNRLQRD  180
KSVLIAEVVK LRQEQQTTRA QMQAMEERIS AAEQKQQQMT VFLARAMKNP GFLQMLVDRQ  240
AGQHGARNRV LEDALSKKRR RPIEYLLTRN GETCAAGESA AMLAADGVAE PDGDTTPRGD  300
GGGGGDTESF WMQLLSLGLE EKQREDGVAG GVQESNSGGA DVDNDEEDDD DDVDVLVQSI  360
YHLSPK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129135LKTIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.12e-86HSF family protein