PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G36690.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 311aa    MW: 34190.5 Da    PI: 8.7148
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G36690.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.21.9e-102272671055
                      HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      rrRR+riN ++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  ONIVA03G36690.1 227 RRRRERINGRLRILQKLVPNG-----TKVDISTMLEEAVRYVKFLQ 267
                      9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MSQDELQQPG QVQWTPAPEE KSEIAVQFFT APYPCQNGQL DHGEHHALGG IGACSSVHWQ  60
PDRGTCYWPP PLSGDGGGGS GSGSSGTGEG GYIGERCYYV GEPDVPIGLN LLVGDNDGAG  120
VVLRDAAPQA KRRTQAGHGG DLGRQKKKAR VSDKRKNSWP IEKIYRCNLH VIMHRNQESM  180
QSGSCSDNES NCSQVNRRKV DRVAGGGNGK VPARRRSATI AQSLYARRRR ERINGRLRIL  240
QKLVPNGTKV DISTMLEEAV RYVKFLQLQI KVEVQIVCHD QMLSSDELWM YAPIVYNGMD  300
LGIDLNISPP R
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1214230RRRSATIAQSLYARRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-34bHLH family protein