PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G37060.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HB-other
Protein Properties Length: 208aa    MW: 22025.2 Da    PI: 10.6419
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G37060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox18.24.1e-061431861250
                      HHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHH.HHHHHHH CS
         Homeobox  12 leeLeelFeknrypsaeereeLAkkl....gLterq.VkvWFqN 50 
                      +e+Le++++++++p  ++r++L  +l    +++ +q +kvWF  
  ONIVA03G37060.1 143 VEALERVYAECPKPRFSRRQQLLCELsilaNIEPKQkIKVWFPK 186
                      689***********************99999987766*****65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MPPVLPSSTM MASSTLEEAA PARAAAGAPL LLLHPLVVTA AAGGGTPAES ATGSPSLLVL  60
PPLRPAAAVV AGGGQIRRPT PADPPSCPLP SLVAAVARSR LRVCRRCPSL MAASDRPPAQ  120
DCRTSSPVAA LPLRPLLRSF PTVEALERVY AECPKPRFSR RQQLLCELSI LANIEPKQKI  180
KVWFPKQKVS KSMQGYTIKL VCLLCVWL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.16e-15HD-ZIP family protein