PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G38760.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 316aa    MW: 33488.9 Da    PI: 5.8155
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G38760.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.91.8e-08166210554
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      h+++Er RR+ri +++  L+el+P+       K + a++L +  +Y+k L
  ONIVA03G38760.1 166 HSIAERLRRERIAERMRALQELVPNT-----NKTDRAAMLDEILDYVKFL 210
                      99***********************7.....5***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MAGQQPQQQG PPEDDFFDQF FSLTSSFPGA APGGRAAGDQ PFSLALSLDA AAAAEASGSG  60
KRLGVGDDAE GGGSKADRET VQLTGLFPPV FGGGGVQPPN LRPTPPTQVL CCSSGLCLSS  120
KSAELALIFV VFHPQQSKQG GAAVGPQPPA PRPKVRARRG QATDPHSIAE RLRRERIAER  180
MRALQELVPN TNKTDRAAML DEILDYVKFL RLQVKVLSMS RLGGAGAVAQ LVADIPLSVK  240
GEASDSGGNQ QIWEKWSTDG TERQVAKLME EDIGAAMQFL QSKALCMMPI SLAMAIYDTQ  300
QTQDGQPVKH EPNTPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171176RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.39e-54bHLH family protein