PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G40100.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 260aa    MW: 27098.8 Da    PI: 6.161
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G40100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.92.3e-056891326
                     HHHHHHHHHHHHHHHHHHHHHHCT CS
              HLH  3 rahnerErrRRdriNsafeeLrel 26
                     r+h e+E+rRR+ri+s +++Lr +
  ONIVA03G40100.1 68 RNHREAEKRRRERIKSHLDRLRAI 91
                     78*******************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MFPVEVAAAA AAAGRMQGEA VVPMMLPPFF MDSGIWPAAA GVVDVAASAE EEAAAAAAAQ  60
DRALAASRNH REAEKRRRER IKSHLDRLRA IDKASLLAKA VERVRDLKQR MAGIGEAAPA  120
HLFPTEHDEI VVLASGGGGV GGAGGAAAVF EASVCCDDRS DLLPELIETL RALRLRTLRA  180
EMATLGGRVR NVLVLARDAG GAGEGGDGDD DRAGYSAVSN DGGDFLKEAL RALVERPGAA  240
AGDRPKRRRV VSDMNMQAAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1246250KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.12e-15bHLH family protein