PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G40320.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 314aa    MW: 34989.6 Da    PI: 7.1466
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G40320.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.42.3e-52151401128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      lppGfrFhPtd+elv +yL++k++g++l++  +i+evd+yk++PwdLp+++  + +ewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v  
  ONIVA03G40320.1  15 LPPGFRFHPTDDELVEHYLCRKAAGQRLPV-PIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAP 107
                      79****************************.88***************8777899*************************************99 PP

              NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +g++ g+kk Lvfy g+ap+g+ktdW+mheyrl
  ONIVA03G40320.1 108 -RGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRL 140
                      .999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MGMRRERDAE AELNLPPGFR FHPTDDELVE HYLCRKAAGQ RLPVPIIAEV DLYKFDPWDL  60
PERALFGARE WYFFTPRDRK YPNGSRPNRA AGNGYWKATG ADKPVAPRGR TLGIKKALVF  120
YAGKAPRGVK TDWIMHEYRL ADAGRAAAGA KKGSLRLDDW VLCRLYNKKN EWEKMQQGKE  180
VKEEASDMVT SQSHSHTHSW GETRTPESEI VDNDPFPELD SFPAFQPAPP PATAMMVPKK  240
ESMDDATAAA AAAATIPRNN SSLFVDLSYD DIQGMYSGLD MLPPGDDFYS SLFASPRVKG  300
TTPRAGAGMG MVPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.11e-80NAC family protein