PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G41670.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 354aa    MW: 40498.9 Da    PI: 8.6755
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G41670.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.43.5e-15381141494
                      T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
               B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                      + +++p k ae ++g+ ++     l+++sg++W+v +   k  ++ +l++GW++F+ka++L+e+D + F+ +g+ ++++ +
  ONIVA03G41670.1  38 HGISIPEKVAEIFSGQITK--GFNLKSPSGETWRVGV--AKVADELILKSGWEDFAKAHELQENDLLFFTCNGHGNGSCSF 114
                      459*******777777555..59999***********..*******************************77665554443 PP
2B348.41.7e-15247344198
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 
                      f+ vl +++v ++++l++p +fa++h +   +s ++ l    + ++W+vk+ y +++ +++     W +F ++n+L+eg +++F+l++  ++ +
  ONIVA03G41670.1 247 FVVVLQTAHVRRRNILIVPTRFAADHLER--KSHDILLIRpNRKQKWSVKYYYlSNTTRGFNCH-RWIKFIRENRLREGNVCIFELMKGaRRPT 337
                      788999********************544..45567776636779******8865555555544.8*******************997768888 PP

                      .EEEEE- CS
               B3  92 lvvkvfr 98 
                      ++v+v+ 
  ONIVA03G41670.1 338 MTVHVIG 344
                      9999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MGEKGCESCR KWQEHYYREH MDVSRIRFFR LMTGDFAHGI SIPEKVAEIF SGQITKGFNL  60
KSPSGETWRV GVAKVADELI LKSGWEDFAK AHELQENDLL FFTCNGHGNG SCSFDVLIFD  120
ASGCEKVSCF FTGKKNSYMC KNFNSIGGQV AGQYLSSDSE DTSTPSVLIG SPHKASTSKK  180
LSGKTKTNPR KEPEDPNCSH WHVIEEKNTD DDEHADYHYT RFANYLTGEE RDEIFSLVSL  240
QPGNPVFVVV LQTAHVRRRN ILIVPTRFAA DHLERKSHDI LLIRPNRKQK WSVKYYYLSN  300
TTRGFNCHRW IKFIRENRLR EGNVCIFELM KGARRPTMTV HVIGKADNRF VLLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-29B3 family protein