PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G02150.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CPP

Protein Properties

Length: 211aa MW: 23790.8 Da PI: 8.6756

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G02150.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	40.2	6.9e-13	61	99	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++++C+C ks+C+k+YC Cf+a +Cs++C+C++CkN+e ONIVA04G02150.1 61 QHRSCRCVKSNCVKLYCLCFSAYGYCSQNCRCTNCKNRE 99 6789*********************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MGQASISSSS SSPAPSTVAA FSPLRPPSAA SHTNQGMRAS LPLALLLLLR LISARSMSND 60 QHRSCRCVKS NCVKLYCLCF SAYGYCSQNC RCTNCKNREY YEDFVEERVD MIKMKNPRAF 120 DPKIVRVQDA SEIEPQSSNA VLHEVRCTSK CQCIDCGNGP RTKCEYTRLL FLFPCLMTSK 180 CVINCFGIAW KHRILILFFT HVIFFVLNIF I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04850.1	2e-15	CPP family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G02150.1