PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G06040.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 196aa    MW: 21057.8 Da    PI: 6.8857
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G06040.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY23.98.6e-082231535
                     -TT-SS-EEEEEE-ST.T---E CS
             WRKY 15 vkgsefprsYYrCtsa.gCpvk 35
                      kg+++pr+YYrCt a gC++ 
  ONIVA04G06040.1  2 AKGNPCPRAYYRCTVAvGCSAA 23
                     59*************9999874 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MAKGNPCPRA YYRCTVAVGC SAAVAKSSSA NAATTEMLEL LRDFSDYSSF NSDISGELER  60
LAAAVTPRSD ASRVVAVDLN SGNSSSSRLT TTTPPPLLQL GRWQALPFIV PTGRCASLAA  120
IVKEISGRRA SPPWTSAAGD AVIPSYENHV TEVSTCVKHS SSHTDIDCLR LSITTPFHDY  180
DVITLIDKII YPLFWC