PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G06580.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 201aa    MW: 21443.1 Da    PI: 11.1404
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G06580.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.63.7e-10107151347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+  +I+r +   Rt+ q+ s+ qky
  ONIVA04G06580.1 107 PWTEEEHRLFLLGLDKFGKGDLQSISRNFVISRTPTQVASHAQKY 151
                      7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MAEGADDGDG APGRSSPAVC VRGGARRPSE RGEELAGRPC AGRSSHAVLA RGRSCSSPVI  60
GSSGSAVGDC PRLPVYTNAW RKSGGGGRYD GGKCCSKAEQ KRRKGIPWTE EEHRLFLLGL  120
DKFGKGDLQS ISRNFVISRT PTQVASHAQK YFIRLNSMNR DRRRSSIHDI TSVTAGDVAA  180
QQGPITGQAK AALRRRSGHR A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.16e-39MYB family protein