PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G06690.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 430aa    MW: 46756.2 Da    PI: 10.0278
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G06690.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.82.3e-1424119499
                      E-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
               B3   4 vltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                      vl+ps+  k   +++  + a++      gg  ++  t ++ ++ g+ W+v + +r ++gr +l++GW eF+ a+gL +g fvv+++ g  ++ l
  ONIVA04G06690.1  24 VLVPSSFRK---MRICDELAAQLgvgvgGGGAPRAATARVASPLGKAWDVGV-VRDGDGRAFLGRGWAEFAAAHGLGVGWFVVLRHGG-GGGVL 112
                      555555444...568888887779999955566888****************.688888899***********************866.78878 PP

                      EEEEE-S CS
               B3  93 vvkvfrk 99 
                       v +f++
  ONIVA04G06690.1 113 AVEAFDT 119
                      9988876 PP
2B351.32e-161552341496
                      T-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
               B3  14 grlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                      + +++p kf++++  g++ +s + ++ ++ g+sW+v+l  +k +++++l++GW +F + +g+  gD+v+F+++g+  f  +++v
  ONIVA04G06690.1 155 DKMRIPDKFVRDYiTGENLNSNMAIILSPLGKSWRVEL--DKDQSGVFLGGGWLQFLSFHGISRGDVVIFRYEGNLVF--KISV 234
                      5699**********555567889999************..*******************************9986666..5555 PP
3B377.61.3e-24322417184
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.............-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EE CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg.............rsWevkliyrkksgr.yvltkGWkeFvkangLkegDfv 80 
                      ++k++++++vl++++l+l ++f+e++g+ +e+s++l++ d+++             rsWev+   r+++++ y+l++GW++F+++ng+++gD++
  ONIVA04G06690.1 322 WIKKEINEYVLERCILSLARTFCESIGLAEESSIKLMMVDTTStqgdqggssssssRSWEVTG--RRYKDAcYLLGAGWRRFCEDNGVRSGDVC 413
                      789*************************************99999******************..9999999********************** PP

                      EEEE CS
               B3  81 vFkl 84 
                      vF++
  ONIVA04G06690.1 414 VFTV 417
                      **95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MGSRGDHGGG GGGRGAARAT QLKVLVPSSF RKMRICDELA AQLGVGVGGG GAPRAATARV  60
ASPLGKAWDV GVVRDGDGRA FLGRGWAEFA AAHGLGVGWF VVLRHGGGGG VLAVEAFDTT  120
CCLRVFGAPP AEAGRATDTS RKPQFLTVLL PGIMDKMRIP DKFVRDYITG ENLNSNMAII  180
LSPLGKSWRV ELDKDQSGVF LGGGWLQFLS FHGISRGDVV IFRYEGNLVF KISVFGPNGR  240
QKDFKAKGIS IHQGTGEQQE APSFSRRKCN NKKKSRFGED DGNQQEMPCS RKGSGNKGRT  300
SDRETKRMRK TRSVYEIGPR SWIKKEINEY VLERCILSLA RTFCESIGLA EESSIKLMMV  360
DTTSTQGDQG GSSSSSSRSW EVTGRRYKDA CYLLGAGWRR FCEDNGVRSG DVCVFTVLDT  420
TLWRVDIERC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.13e-17B3 family protein