PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G06710.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 429aa    MW: 47022.1 Da    PI: 9.4499
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G06710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.79e-1321123399
                      EE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
               B3   3 kvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFk 83 
                      kvl+ps+ +k   ++++ + a++            gg +++    ++ ++ g++W+v++    ++ +g+ +l++GW eF+ a+gL  g fvv +
  ONIVA04G06710.1  21 KVLMPSSFHK---MRISDELAADLlgergdgggggGGAPRR--AARVVSPVGKVWDVEVGRddDGDGGGAFLGRGWAEFAAAHGLGMGWFVVVR 109
                      5555555554...4577777777777778888775455444..69999***********6655666666************************* PP

                      E-SSSEE..EEEEE-S CS
               B3  84 ldgrsefelvvkvfrk 99 
                      ++g  ++ l+vk+f++
  ONIVA04G06710.1 110 HEG--GGVLTVKLFDT 123
                      755..7778***9997 PP
2B331.14.1e-101602371696
                      EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
               B3  16 lvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                       ++p kf++++  + ++ +  + ++ ++ g+ W+++l  +k   ++++++GW +F + +g+  gD+v+++++g+  f  ++kv
  ONIVA04G06710.1 160 RRIPAKFVQHYiaE-EHLNIHMASILSPLGKFWRIEL--EKDELGMFFKGGWLQFLSFHGISPGDVVLLRHEGNLVF--KIKV 237
                      689*****888742.333344788999**********..****9**************************8876666..5555 PP
3B3727.7e-23321415186
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.......-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE- CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg.......rsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkld 85 
                      ++k+++++++l++g+++lp  f++++g+++e+++tl++++++g       rsWev ++++k++ +   +l +GWk+F++angL +gD+++F+++
  ONIVA04G06710.1 321 WIKKEISNYMLENGNISLPGIFCKSIGLVEETTITLMINSSRGrssssssRSWEVACSVNKNGYGccNLLPSGWKRFCQANGLLVGDVCTFSVV 414
                      7899*****************************************************99666666779***********************964 PP

                      S CS
               B3  86 g 86 
                      +
  ONIVA04G06710.1 415 E 415
                      3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    
MPGDHAGAGA AVGAAKAMQL KVLMPSSFHK MRISDELAAD LLGERGDGGG GGGGAPRRAA  60
RVVSPVGKVW DVEVGRDDDG DGGGAFLGRG WAEFAAAHGL GMGWFVVVRH EGGGVLTVKL  120
FDTTCCLWDF GARPAGNPKD YLHAKFKFII LVFVLFGEIR RIPAKFVQHY IAEEHLNIHM  180
ASILSPLGKF WRIELEKDEL GMFFKGGWLQ FLSFHGISPG DVVLLRHEGN LVFKIKVFGI  240
NGCKKDLKTK DDITIQQSAR NQHETPSFST RKCNKNSRFG EDCKNQLQEI PCSIKGSRKK  300
GRETKRPKKS KSIYEIGPPS WIKKEISNYM LENGNISLPG IFCKSIGLVE ETTITLMINS  360
SRGRSSSSSS RSWEVACSVN KNGYGCCNLL PSGWKRFCQA NGLLVGDVCT FSVVEATLWH  420
VAIDRVERS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1299308KKGRETKRPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.12e-10B3 family protein