PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G09620.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family S1Fa-like
Protein Properties Length: 76aa    MW: 8473.17 Da    PI: 10.6608
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G09620.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA131.81.8e-41976470
             S1FA  4 akvea.kGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                      ++e+ kGlnPG ivllvv++ll++f+vgny+ly+yaqk+lPPrkkkPvskkklkreklkqGv++PGe
  ONIVA04G09620.1  9 IIEEVnKGLNPGTIVLLVVATLLILFFVGNYALYMYAQKTLPPRKKKPVSKKKLKREKLKQGVSAPGE 76
                     456777*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MADQSNNMII EEVNKGLNPG TIVLLVVATL LILFFVGNYA LYMYAQKTLP PRKKKPVSKK  60
KLKREKLKQG VSAPGE