PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G10960.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 242aa    MW: 24530.8 Da    PI: 7.6742
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G10960.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-2062111255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae+Aa+a++aa+++++g
  ONIVA04G10960.1  62 KYRGVRRRP-WGKWAAEIRDP-----HraARVWLGTFATAEDAARAYDAAALRFRG 111
                      8********.**********7.....338************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MALSEPDLAA ETEAIVSALT HVVAYGGGGP PPSEETAASA VTRTAPWRAD GARQGAVPAA  60
RKYRGVRRRP WGKWAAEIRD PHRAARVWLG TFATAEDAAR AYDAAALRFR GGRARLNFPE  120
DAAAADERRA TDAAAAAAAA SSAPAALLES QPGDVADCLD YSRILAGAPE RPTSSTVPDG  180
FFGGGGNGRF LHSWSIGTSP SSSGSGSGGA GGGGGGGGAP VRPLFHGGNG WEQRGDSAYN  240
GF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.13e-16ERF family protein