PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G10990.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 374aa    MW: 39967.1 Da    PI: 4.5134
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G10990.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.46.1e-14133181355
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      ++h   Er RR++++++fe L  l+P++     +K +Ka+i+e +++YIk+Lq
  ONIVA04G10990.1 133 KMHVLTERERRKEMKNKFEILHALIPNL----PEKTDKATIVEATINYIKNLQ 181
                      579999*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MSQEGPNNHP QGTQETHDCP FTIATNTPLG STKMGYSDSR KSDENNTSSK PASPVVSSDV  60
VEIKETWENV VVADEEGEGG EDGFASDASE SKSKSSSDEI DYELLDLLAG ASEGCSGGNN  120
NDEVKNFAYA DHKMHVLTER ERRKEMKNKF EILHALIPNL PEKTDKATIV EATINYIKNL  180
QDKIHKMEML KVEREHAIAL ATAATATAAA SADTALQAPP PSEEENEEHD SVVAAATREM  240
ALADMVHAWE QQQEAAATGG SHGGHAVPPP PPAASLQTWT GPNMTASLTG DDGFITLSLP  300
HQGGQKNLVA GAVSVLERHH IDVVTATVSA SEQGDNLISL HCHLSPGSSS SQNLTPLDKF  360
KLAMSELMLW VISV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.13e-17bHLH family protein