PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G11000.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 329aa    MW: 34838.4 Da    PI: 8.9813
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G11000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.6e-11115158855
                      HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       Er RR+++++ f++L  llPk +     +K +Ka+i+ +A+ YIk L+
  ONIVA04G11000.1 115 TERERRKKMKNMFSTLHGLLPKiP-----GKTDKASIVGEAIGYIKTLE 158
                      7*********************88.....9****************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MSQEGADLSQ DVDESPYHTA VVTTNNLVRS IKAEKSNSSS SSGKPIETDI GLKVASPTMF  60
GFNTKIEGTG KNMAVKREEG EGGGRPGVSS GVSTRDTNGK GKNAMDMEHA LHIWTERERR  120
KKMKNMFSTL HGLLPKIPGK TDKASIVGEA IGYIKTLEDV VQKLETIKTE RVRAHQWAAA  180
AAAAVAANGG GEGSSHSHSQ PPRHATAVTV AVAEPAPVAA AVNAQAPQKK AAAAAAPTLQ  240
TWSAPNITLT MAGVDAFINM CLPRQRASFT TVAFVLEKHQ IDVVTSTISA DHDKSLFSLN  300
EASLQSTEGL TPEAKYKLAV SELMVRLAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.14e-22bHLH family protein