PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G12040.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 834aa MW: 92208.3 Da PI: 6.8907

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G12040.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.6	4.3e-52	10	139	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 +ppGfrFhPtdeel+ +yLkkkv +k++l evi+evd++k+ePwdL++ ++ + ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk ONIVA04G12040.1 10 VPPGFRFHPTDEELLLYYLKKKVGFEKFDL-EVIREVDLNKIEPWDLQErcRIGSaPQNEWYFFSHKDRKYPTGSRTNRATTAGFWKATGRDKC 102 69**************************.99**********963433332566******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + + +++g++ktLvfy+grap+g+ktdW+mheyrle ONIVA04G12040.1 103 IRT-SYRKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 139 9.8999****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 834 aa Download sequence
MAAFSSSNGV PPGFRFHPTD EELLLYYLKK KVGFEKFDLE VIREVDLNKI EPWDLQERCR 60 IGSAPQNEWY FFSHKDRKYP TGSRTNRATT AGFWKATGRD KCIRTSYRKI GMRKTLVFYR 120 GRAPHGQKTD WIMHEYRLED ADDSQSASSE DGWVVCRVFK KKCFFKIGGG GGGEGSGGSQ 180 GGDVGGGHLA VSPPLGGGHA MAAASHYMHP HHQYHHHHHH AAAASPFYYT QMPPPAAAAP 240 PHAAYSHHVQ VQDLLTNHRP SADAGYDFSG LPAVDHHHHH PGLDVGSSDG GGGVAAGGAD 300 GDQAAAAAAA GSTDQQQWQA MDGFSNGGAG AAAAVQQQLG AMSSGQRGGE MDLWGYGRLT 360 FYIFGNASPS NLTQASYIIE AFQKCHVDHP VKKFFGECTD LKIKLDQCFR QEKALKRKAN 420 FEESKKFKEQ NKDNYVICPF KFQVNQDTRT SRGAGEREKM DPVPLFNPCE MGRFTFSHRI 480 VLAPLTRARS YGNLPQSHAI LYYSQRATKG GLLISEATGV SSDAPCTNTP GIWTKEQVEA 540 WKPVVDAVHA KGGIFFCQIW HVGRASDLEQ EPISSTDKPV EKNEDMDFPV PRRLAVEEIP 600 DVINHFRIAA RNAIDAGFDG VEVHGAHGFL LEQFMKDGVN DRADEYGGSL QNRCRFALEV 660 IDAVSTEVGP DRVGFRISPY ISYYGCHDSD PDALGVYMAR ELDRRGVLYC SVVEPEMVAA 720 TTVVDCETTT TMSRRMMIPH RLHGMREAFR RGMFMVGGGY DRDAGNMAVA SGYADMVVFG 780 RLFLANPDLP RRFQLDAPLN KYDRATFYTH DPVVGYTDYP FLDDDREAMS DHTG

Sequence ? help Back to Top

Protein Sequence Length: 834 aa Download sequence

MAAFSSSNGV PPGFRFHPTD EELLLYYLKK KVGFEKFDLE VIREVDLNKI EPWDLQERCR  60
IGSAPQNEWY FFSHKDRKYP TGSRTNRATT AGFWKATGRD KCIRTSYRKI GMRKTLVFYR  120
GRAPHGQKTD WIMHEYRLED ADDSQSASSE DGWVVCRVFK KKCFFKIGGG GGGEGSGGSQ  180
GGDVGGGHLA VSPPLGGGHA MAAASHYMHP HHQYHHHHHH AAAASPFYYT QMPPPAAAAP  240
PHAAYSHHVQ VQDLLTNHRP SADAGYDFSG LPAVDHHHHH PGLDVGSSDG GGGVAAGGAD  300
GDQAAAAAAA GSTDQQQWQA MDGFSNGGAG AAAAVQQQLG AMSSGQRGGE MDLWGYGRLT  360
FYIFGNASPS NLTQASYIIE AFQKCHVDHP VKKFFGECTD LKIKLDQCFR QEKALKRKAN  420
FEESKKFKEQ NKDNYVICPF KFQVNQDTRT SRGAGEREKM DPVPLFNPCE MGRFTFSHRI  480
VLAPLTRARS YGNLPQSHAI LYYSQRATKG GLLISEATGV SSDAPCTNTP GIWTKEQVEA  540
WKPVVDAVHA KGGIFFCQIW HVGRASDLEQ EPISSTDKPV EKNEDMDFPV PRRLAVEEIP  600
DVINHFRIAA RNAIDAGFDG VEVHGAHGFL LEQFMKDGVN DRADEYGGSL QNRCRFALEV  660
IDAVSTEVGP DRVGFRISPY ISYYGCHDSD PDALGVYMAR ELDRRGVLYC SVVEPEMVAA  720
TTVVDCETTT TMSRRMMIPH RLHGMREAFR RGMFMVGGGY DRDAGNMAVA SGYADMVVFG  780
RLFLANPDLP RRFQLDAPLN KYDRATFYTH DPVVGYTDYP FLDDDREAMS DHTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-76	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G12040.1