PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G15500.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 137aa    MW: 15118.6 Da    PI: 7.5789
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G15500.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS61.81.4e-1938134194
             GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPil 91 
                      lv+ L++cA+ vs+g++e+a  +Larl e+as +g  p++R+aayf e L  r++r++++++++ pp+e +++    ++ ++al++++ ++Pil
  ONIVA04G15500.1  38 LVRMLTACADSVSAGNHEAAIYYLARLCEMASLAGpMPIHRVAAYFIEVLTLRVVRMWPHMFNISPPREPANDAfsGDDDAMALRILNTITPIL 131
                      6789*******************************99********************************9988798999**************9 PP

             GRAS  92 kfs 94 
                       ++
  ONIVA04G15500.1 132 LLG 134
                      776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MGAGRRRQQK MMPPPLSNFD ARNGVPTPGQ AEQETMELVR MLTACADSVS AGNHEAAIYY  60
LARLCEMASL AGPMPIHRVA AYFIEVLTLR VVRMWPHMFN ISPPREPAND AFSGDDDAMA  120
LRILNTITPI LLLGKHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.16e-24GRAS family protein