PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G15630.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Nin-like

Protein Properties

Length: 930aa MW: 100909 Da PI: 5.9535

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G15630.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.1	8.4e-29	558	609	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isl++l+kyFs+++kdAAk+Lgvc+T+LKriCR++GI+RWP+Rki+++ ONIVA04G15630.1 558 AEKNISLDVLRKYFSGSLKDAAKSLGVCPTTLKRICRHHGISRWPSRKINKV 609 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 930 aa Download sequence
MDMPTPSNRA GCNGNTGGTM GPSDDPYGAA AMNLDCYSEI YSPSVADQLF SLLNDPAAHR 60 MFAMWPSMGS SPCAAGTSED MPLDAYSGLG EAVEEPSQIM SVNPTEAEKT GKSSGELGSD 120 DGAHQGSSMV PRSVVGSSLA DRMLMALSLF RESLGSGALA QVWMPVEQEG HVVLSTCEQP 180 FLLDQVLAGY REVSRHFVFS AKEEPGLQPG LPGRVFISGV PEWTSSVLYY NRPEYLRMEH 240 ALHHEIRGSL AMPIYDPSKD SCCAVFELVT RKEKPDFSAE MDNAVNLKAT KGSSNQKFYT 300 ENQKFAFTEI LDVLRAICHA HMLPLALTWV PTPNGIDGGY VVGKDGASFS QSGKTIICIH 360 ESACYVNDGK MQGFLQACAR RHLEKGQGIA GRALKSNLPF FSPDIREYSI EDYPLAHHAR 420 KFSLHAAVAI RLRSTYTGND DYILEFFLPV SCKGSGEQQI LLNNLSSTMQ RICKSLRTVY 480 EAEVDNVNAG TAAVFRKNNE SCLPTGHTES SSHGDQSITG ASFEDTSLAN KPGVMEPELA 540 EQVQPSSIGH AEKKRSTAEK NISLDVLRKY FSGSLKDAAK SLGVCPTTLK RICRHHGISR 600 WPSRKINKVN RSLKKIQTVI NSVHGVDRSL QYDPATGSLV PVVSLPEKLT FPSCDGLPTP 660 SVGKTVEENS DLKSEEGCSL PDGSQRQSCQ LQISDVKKSN EDEFHIGSGN SDFYGANATA 720 KSNSEVTQGP LCPTGAFSAL HLKGTDCTNP SSSLRPSSES TRNQIVGRNS PSIQQEDLDM 780 LDNHEAEDKD HMHPSTSGMT DSSSGSASSH PIFKQNTRSA LKDAASPALT VKATYNGDTV 840 RFKFLPSMGW YHLLEEIAKR FKLPTGAFQL KYKDDEDEWV ILANDSDLQE CVDVLDSIGS 900 RIVKLQVRDL PCIVSSSGSS TCLQLAAHSS

Sequence ? help Back to Top

Protein Sequence Length: 930 aa Download sequence

MDMPTPSNRA GCNGNTGGTM GPSDDPYGAA AMNLDCYSEI YSPSVADQLF SLLNDPAAHR  60
MFAMWPSMGS SPCAAGTSED MPLDAYSGLG EAVEEPSQIM SVNPTEAEKT GKSSGELGSD  120
DGAHQGSSMV PRSVVGSSLA DRMLMALSLF RESLGSGALA QVWMPVEQEG HVVLSTCEQP  180
FLLDQVLAGY REVSRHFVFS AKEEPGLQPG LPGRVFISGV PEWTSSVLYY NRPEYLRMEH  240
ALHHEIRGSL AMPIYDPSKD SCCAVFELVT RKEKPDFSAE MDNAVNLKAT KGSSNQKFYT  300
ENQKFAFTEI LDVLRAICHA HMLPLALTWV PTPNGIDGGY VVGKDGASFS QSGKTIICIH  360
ESACYVNDGK MQGFLQACAR RHLEKGQGIA GRALKSNLPF FSPDIREYSI EDYPLAHHAR  420
KFSLHAAVAI RLRSTYTGND DYILEFFLPV SCKGSGEQQI LLNNLSSTMQ RICKSLRTVY  480
EAEVDNVNAG TAAVFRKNNE SCLPTGHTES SSHGDQSITG ASFEDTSLAN KPGVMEPELA  540
EQVQPSSIGH AEKKRSTAEK NISLDVLRKY FSGSLKDAAK SLGVCPTTLK RICRHHGISR  600
WPSRKINKVN RSLKKIQTVI NSVHGVDRSL QYDPATGSLV PVVSLPEKLT FPSCDGLPTP  660
SVGKTVEENS DLKSEEGCSL PDGSQRQSCQ LQISDVKKSN EDEFHIGSGN SDFYGANATA  720
KSNSEVTQGP LCPTGAFSAL HLKGTDCTNP SSSLRPSSES TRNQIVGRNS PSIQQEDLDM  780
LDNHEAEDKD HMHPSTSGMT DSSSGSASSH PIFKQNTRSA LKDAASPALT VKATYNGDTV  840
RFKFLPSMGW YHLLEEIAKR FKLPTGAFQL KYKDDEDEWV ILANDSDLQE CVDVLDSIGS  900
RIVKLQVRDL PCIVSSSGSS TCLQLAAHSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-179	Nin-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G15630.1