PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G16580.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 392aa    MW: 43694 Da    PI: 8.3116
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G16580.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.81.7e-09631794126
              NAM   4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                      G  F+Pt e++v++yL  + + +   l + ++++d+y ++P  L     +a+e+ ew+fF++r++    g  ++ra   g  + + + k   + 
  ONIVA04G16580.1  63 GQPFDPTAEDIVNRYLPLRRALRCDALPRQVHDADVYGAHPALLAsVYPAANERfEWFFFVCRRRCP-GG--RRRA-GPGDYRLSQEAK---H- 148
                      667************977766666556567**************83333344457******998854.33..2333.445555444322...2. PP

              NAM  96 kgelvglkktLvfykgrapkg..ektdWvmhey 126
                        +     +++ +y+ ++  g  ++t+W m ey
  ONIVA04G16580.1 149 --RGNAFCHSFRYYEYEDAGGgfRETEWRMVEY 179
                      ..2235667888886655544235899999988 PP
2NAM24.95.6e-0823435713128
              NAM  13 elvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eek.ewyfFskrdkkyatgk......rknratksgyWkatgkdkevlskkge 98 
                       lv+ yL+    g++l + +v +  d+++++P  + +++ a +++ ew+f + r + +a+g+      r+++ +  g      + + v   ++ 
  ONIVA04G16580.1 234 VLVQLYLASLRLGNPLAC-RVHRADDVFDAHPAVITAALPAaNDRcEWFFAAVRPRGHAQGHgdgappRPRK-AGPGAYVPVRECRVVDG-RRG 324
                      58999****999999998.666667*********98533331444699999999999998777777645544.57799998888776666.888 PP

              NAM  99 lvglkktLvfy...kgrapkgektdWvmheyrl 128
                      ++g++ ++ +    ++ ++ +++t+W m+eyr+
  ONIVA04G16580.1 325 DMGCRLVFWYReddEEARRASRRTEWWMDEYRF 357
                      9***9999888554344555679********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    
MRPRASQAAA PETAAAAESL REEETEDGWV FLAGRSRATR PPPPPPSPMA RVVASGSSGG  60
GGGQPFDPTA EDIVNRYLPL RRALRCDALP RQVHDADVYG AHPALLASVY PAANERFEWF  120
FFVCRRRCPG GRRRAGPGDY RLSQEAKHRG NAFCHSFRYY EYEDAGGGFR ETEWRMVEYG  180
DRGRDAGAGG SEGFELVVCK VYPARGGALH ERLGADRAVL ATRHRADEDA KPQVLVQLYL  240
ASLRLGNPLA CRVHRADDVF DAHPAVITAA LPAANDRCEW FFAAVRPRGH AQGHGDGAPP  300
RPRKAGPGAY VPVRECRVVD GRRGDMGCRL VFWYREDDEE ARRASRRTEW WMDEYRFGPD  360
FPYGELPAPM ARGEDEELVV YKVYPRLVGN RR