PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G18450.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

DBB

Protein Properties

Length: 254aa MW: 26988.1 Da PI: 4.8996

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G18450.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.6	1.9e-06	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ + + ++ fC ++ lC+ C H+ H+ ONIVA04G18450.3 4 QCDVCAAEAASVFCCADEAALCDACDRRVHSAnklagkHR 43 7**************************9996566777776 PP
2	zf-B_box	26.3	1.6e-08	59	92	2	35
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHk 35 +++ C+ ++ek+ lfC++++ lC++C ++ H ONIVA04G18450.3 59 KPPLCDICQEKRGFLFCKEDRAILCRECDVAVHT 92 6899***************************994 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MKVQCDVCAA EAASVFCCAD EAALCDACDR RVHSANKLAG KHRRFSLLQP LASSSSAQKP 60 PLCDICQEKR GFLFCKEDRA ILCRECDVAV HTTSELTRRH GRFLLTGVRL SSAPMDSPAP 120 SEEEEEEAGE DYSCSPSSVA GTAAGSASDG SSISEYLTKT LPGWHVEDFL VDEATAAAAA 180 ASSSSDGLFQ GGLLAQIGGV PDGYAAWAGR EQLHSGVAVA ADERASRERW VPQMNAEWGA 240 GSKRPRASPP CLYW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	9e-29	DBB family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G18450.3