PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G18780.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 247aa MW: 26800.3 Da PI: 7.838

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G18780.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.7	4.4e-32	166	224	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+H+h+ ONIVA04G18780.1 166 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHTHT 224 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MEGSQLETAC LPAALYAPLC PYTPPSPPSF LAPLPSLQHK LPQLPQLVHD HAAATGTNHG 60 VMFSSDHGCL YPLLPGIPFC LDSGCGAAAC DDDKPAGFAH LGSAEADTSA AAAARVDSEI 120 AAAATATTCH GPNSWWKGTE KGKMKVRRKM REPRFCFQTR SDVDVLDDGY KWRKYGQKVV 180 KNSLHPRSYY RCTHNNCRVK KRVERLSEDC RMVITTYEGR HTHTPCSDDA TTGAAGDHTA 240 SCAFTSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44745.1	2e-58	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G18780.1