PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G22720.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 358aa MW: 38065.3 Da PI: 7.2046

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G22720.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.6	4.5e-13	93	144	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + + + a+i+ A++++k+L+ ONIVA04G22720.1 93 QRMTHIAVERNRRRQMNEYLAVLRSLMPES---YVHRGDQASIVGGAIDFVKELE 144 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MALDTLCSAG GDVLIYDTFN ASAAAAAAVV PPASFLFGNN NAGGAAGTET RVQVAAGAVP 60 EVDQLLKQAQ QPGRRKRRRR ARSCKSREDA ESQRMTHIAV ERNRRRQMNE YLAVLRSLMP 120 ESYVHRGDQA SIVGGAIDFV KELEQLLQSL EAQKRTLLMQ PPPPPQQQRE PKCDAADSTS 180 AADQETPAAA AADGPPFARF FTYPQYVWCH NPAQDGGGGG GAAAENRAGV ADIEVSLVET 240 HASIRVMAAR RPGQLLKMVA GLQALRLTVL HLNVTALGSL ALYSISVKRF HGGKAIASLG 300 PLGVFFLYAL YLWYSTTVVE EGCGMATVDD IAAAVHHVLC IIDAEAASQM LLAGEASG

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MALDTLCSAG GDVLIYDTFN ASAAAAAAVV PPASFLFGNN NAGGAAGTET RVQVAAGAVP  60
EVDQLLKQAQ QPGRRKRRRR ARSCKSREDA ESQRMTHIAV ERNRRRQMNE YLAVLRSLMP  120
ESYVHRGDQA SIVGGAIDFV KELEQLLQSL EAQKRTLLMQ PPPPPQQQRE PKCDAADSTS  180
AADQETPAAA AADGPPFARF FTYPQYVWCH NPAQDGGGGG GAAAENRAGV ADIEVSLVET  240
HASIRVMAAR RPGQLLKMVA GLQALRLTVL HLNVTALGSL ALYSISVKRF HGGKAIASLG  300
PLGVFFLYAL YLWYSTTVVE EGCGMATVDD IAAAVHHVLC IIDAEAASQM LLAGEASG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	74	80	RRKRRRR
2	75	79	RKRRR
3	75	82	RKRRRRAR
4	94	105	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	7e-47	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G22720.1