PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G23100.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 464aa MW: 51549.8 Da PI: 5.0441

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G23100.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.7	1.6e-11	264	310	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +a+ + Er RR+++N +f +Lr l P++ +K++ a+i+ A+eYI +L ONIVA04G23100.1 264 KANFATERERREQLNVKFRTLRMLFPNP-----TKNDRASIVGDAIEYIDEL 310 68899*********************.....9*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MIVGAGYFED SHDQSLMAGS LIHDSNQAPA SSENTSIDLQ KFKVHPYSTE ALSNTANLAE 60 AARAINHLQH QLEIDLEQEV PPVETANWDP AICTIPDHII NHQFSEDPQN ILVEQQIQQY 120 DSALYPNGVY TPAPDLLNLM QCTMAPAFPA TTSVFGDTTL NGTNYLDLNG ELTGVAAVPD 180 SGSGLMFASD SALQLGYHGT QSHLIKDICH SLPQNYGLFP SEDERDVIIG VGSGDLFQEI 240 DDRQFDSVLE CRRGKGEFGK GKGKANFATE RERREQLNVK FRTLRMLFPN PTKNDRASIV 300 GDAIEYIDEL NRTVKELKIL VEQKRHGNNR RKVLKLDQEA AADGESSSMR PVRDDQDNQL 360 HGAIRSSWVQ RRSKECHVDV RIVDDEVNIK LTEKKKANSL LHAAKVLDEF QLELIHVVGG 420 IIGDHHIFMF NTKVSEGSAV YACAVAKRLL QAVDVQHQAL DIFN

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MIVGAGYFED SHDQSLMAGS LIHDSNQAPA SSENTSIDLQ KFKVHPYSTE ALSNTANLAE  60
AARAINHLQH QLEIDLEQEV PPVETANWDP AICTIPDHII NHQFSEDPQN ILVEQQIQQY  120
DSALYPNGVY TPAPDLLNLM QCTMAPAFPA TTSVFGDTTL NGTNYLDLNG ELTGVAAVPD  180
SGSGLMFASD SALQLGYHGT QSHLIKDICH SLPQNYGLFP SEDERDVIIG VGSGDLFQEI  240
DDRQFDSVLE CRRGKGEFGK GKGKANFATE RERREQLNVK FRTLRMLFPN PTKNDRASIV  300
GDAIEYIDEL NRTVKELKIL VEQKRHGNNR RKVLKLDQEA AADGESSSMR PVRDDQDNQL  360
HGAIRSSWVQ RRSKECHVDV RIVDDEVNIK LTEKKKANSL LHAAKVLDEF QLELIHVVGG  420
IIGDHHIFMF NTKVSEGSAV YACAVAKRLL QAVDVQHQAL DIFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	1e-56	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G23100.1