PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G24570.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 311aa    MW: 33636.5 Da    PI: 6.9621
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G24570.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1652.7e-51111541128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                      lppGfrFhP+deelvv+yL +k++g        +       ++ +vd++k+ePw+Lp +++ + +ewyfFs +d+kyatg+r+nrat+sgyWka
  ONIVA04G24570.1  11 LPPGFRFHPRDEELVVDYLYHKLSGGGgagageF---YggvAMVDVDLNKCEPWELPDAARVGATEWYFFSLHDRKYATGQRTNRATRSGYWKA 101
                      79**********************9997665442...144369**************8888899****************************** PP

              NAM  86 tgkdkevlsk..........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      tgkd++++++          +ge+vg++ktLvfy+grap+g+kt+Wvmhe+r+
  ONIVA04G24570.1 102 TGKDRAIVTRrraaggeavaGGEVVGMRKTLVFYQGRAPRGSKTEWVMHEFRV 154
                      *********977877777776677***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MSLISMMEAN LPPGFRFHPR DEELVVDYLY HKLSGGGGAG AGEFYGGVAM VDVDLNKCEP  60
WELPDAARVG ATEWYFFSLH DRKYATGQRT NRATRSGYWK ATGKDRAIVT RRRAAGGEAV  120
AGGEVVGMRK TLVFYQGRAP RGSKTEWVMH EFRVDGHAVA DHPSSSTSSS SSNLLKEDWV  180
LCRVFYKSRT ANPRPVVSGE AAVSLSGELS LPPPPPLPVA PAVVDGYTGG GYYEQDSSAG  240
CHHHHHRPPT SAALPFKDLT DFRDLLSNMV QGGGGAAAAA KSEGFHLGWS EEESSGYVQQ  300
SAMASQAWNP F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12977.18e-66NAC family protein