PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G25390.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 104aa    MW: 11185.5 Da    PI: 9.4407
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G25390.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.35e-0730711454
                     HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
              HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                     d+i + +++L+ llP+ + ++++ + s a +L++++ YI+sL
  ONIVA04G25390.1 30 DQIAELLSKLQALLPEsQARNGAHRGSAARVLQETCSYIRSL 71
                     68999***********666888888***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MSSSRRSRSR RAGSSVPSSS SSSRTSISED QIAELLSKLQ ALLPESQARN GAHRGSAARV  60
LQETCSYIRS LHQEVDNLSE TLAQLLASPD VTSDQAAVIR SLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.14e-26bHLH family protein