PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G29260.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NF-YC
Protein Properties Length: 122aa    MW: 13162 Da    PI: 8.5087
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G29260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC100.21.5e-31221121999
            NF-YC  19 helPlarikkilka...dedv.......kmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                      h+lPlarikki+k    d  v       +mis eaPv++skacelfi elt r+w  + e krrt++k d+aaav++td fdflvd+v  d
  ONIVA04G29260.1  22 HALPLARIKKIMKRsagDSSVvdggggaRMISGEAPVVFSKACELFIAELTRRAWAATLEGKRRTVHKEDVAAAVQNTDLFDFLVDVVMAD 112
                      89***********7333343334444448**********************************************************9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MRQARPYSAM FAGGVSARTG PHALPLARIK KIMKRSAGDS SVVDGGGGAR MISGEAPVVF  60
SKACELFIAE LTRRAWAATL EGKRRTVHKE DVAAAVQNTD LFDFLVDVVM ADGHDDDHTD  120
YK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.18e-31NF-YC family protein