PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G01090.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 198aa MW: 21213.1 Da PI: 6.9419

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G01090.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00053	51	73	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++F++ L H +H ONIVA05G01090.1 51 FVCKTCNRVFPSFQALGGHRASH 73 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MKRFAFEDSD MARVLMLMSS HGQQEQALAL PVPVQLPLAA ARGDRAPERA FVCKTCNRVF 60 PSFQALGGHR ASHKKPRLDG DGDLSLSKPK LHGCSICGLE FAIGQALGGH MRRHRAMTGG 120 MPRAIVVDKK PDVVDVHVHG HDDDGGIKRG GLWLDLNHPP CDDAGDDDAE CGHNAAGAGI 180 TFHQFLDTGA MAVDCVGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59820.1	3e-25	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G01090.1