PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G01120.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB
Protein Properties Length: 286aa    MW: 32164.4 Da    PI: 7.1025
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G01120.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.82.9e-1457104148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g+WT++Ed +lv  v+++G ++W+  a+  g++Rt+k+c++rw +yl
  ONIVA05G01120.1  57 KGPWTEQEDVQLVWFVRLFGERRWDFLAKVSGLKRTGKSCRLRWVNYL 104
                      79********************************************97 PP
2Myb_DNA-binding50.83.8e-16110155148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rgr T++E+ l+++++ q+G++ W++Iar ++ gRt++++k++w++++
  ONIVA05G01120.1 110 RGRITADEERLILHLHSQWGSR-WSRIARSLP-GRTDNEIKNFWRTHM 155
                      899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MVVKKAATMA EAEAEEEMMM RMMCGSGGNE MMKTKMKKKN REGEEEEEVS GGGRMRKGPW  60
TEQEDVQLVW FVRLFGERRW DFLAKVSGLK RTGKSCRLRW VNYLHPGLKR GRITADEERL  120
ILHLHSQWGS RWSRIARSLP GRTDNEIKNF WRTHMRKIAH HAKKKTNSPS PAPTTSSGSL  180
SSSLTTATTT MATAAALQES SSCGGDDEAV DQLVAAATTP ASQLLTMDYT MDQLWNDIAA  240
AEADTSCYDA AAMASPPSPV WEFCTDYSLW RIDDEEYYKK MLDASQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.31e-61MYB family protein