PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G01570.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 195aa MW: 22087.8 Da PI: 9.1071

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G01570.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.3	6.2e-12	33	81	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT+eEd l ++ + +G ++ +++a++m+ +R++kqc++rw+++l ONIVA05G01570.1 33 AWTPEEDACLERLARGYGFRHGRRVAEEMQpreRRRSPKQCRDRWRDHL 81 8*********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
METSSSDFSS TTEVAATPSS AMRIILRIRL SPAWTPEEDA CLERLARGYG FRHGRRVAEE 60 MQPRERRRSP KQCRDRWRDH LARDVYHRPF TADDDAELAH LRLRGGGGDR WKDISRAAHC 120 RTSRAMRRRW RELRKSDAFL RALYWHPDQP VPPLLDDAWS CSDVLDSSVA SYRGGCDAVA 180 GGGTIVAPGF ACFAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	1e-14	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G01570.1