PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G01580.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 438aa MW: 49872.7 Da PI: 8.5836

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G01580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.1	1.7e-06	80	102	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cg sF+ + +L++H+++H ONIVA05G01580.1 80 HDCKVCGASFKKPAHLRQHMQSH 102 56*******************99 PP
2	zf-C2H2	19.5	2.7e-06	166	190	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ C+ s+srk++L+rH+ tH ONIVA05G01580.1 166 FSCHvdGCPFSYSRKDHLNRHLLTH 190 89*********************99 PP
3	zf-C2H2	11	0.0013	195	220	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 + Cp C++ F+ k n +rH + H ONIVA05G01580.1 195 FACPmeGCNRKFTIKGNIQRHVQEmH 220 78*******************98877 PP
4	zf-C2H2	20.5	1.2e-06	232	256	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp +Cgk+F+ s L++H +H ONIVA05G01580.1 232 FICPeeNCGKTFKYASKLQKHEESH 256 78*******************9988 PP
5	zf-C2H2	16.7	2.1e-05	323	347	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 +C+ dC+ sFs ksnL +H + H ONIVA05G01580.1 323 RCHlkDCKLSFSKKSNLDKHVKAvH 347 7*******************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MGSVELGAEE REVAGGEGGS KGAAPPARDI RRYKCDFCSV VRSKKGLIRA HVLEHHKDEV 60 DDLDDYLGRG GGETCKEMDH DCKVCGASFK KPAHLRQHMQ SHSLEHWIPE NSKMREGLEW 120 TSTRMGRPFW EAPSRMPLSR SSSGWGDSPE KLHQECLVHT LFQRPFSCHV DGCPFSYSRK 180 DHLNRHLLTH QGKLFACPME GCNRKFTIKG NIQRHVQEMH KDGSPCESKK EFICPEENCG 240 KTFKYASKLQ KHEESHVKLD YSEVICCEPG CMKAFTNLEC LKAHNKSCHR HVVCDVCGTK 300 QLKKNFKRHQ RMHEGSCVTE RVRCHLKDCK LSFSKKSNLD KHVKAVHEQK RPFVCGFSGC 360 GKSFSYKHVR DNHEKSSAHV YVQANFEEID GERPRQAGGR KRKAIPVESL MRKRVAAPDD 420 DAPACDDGTE YLRWLLSG

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MGSVELGAEE REVAGGEGGS KGAAPPARDI RRYKCDFCSV VRSKKGLIRA HVLEHHKDEV  60
DDLDDYLGRG GGETCKEMDH DCKVCGASFK KPAHLRQHMQ SHSLEHWIPE NSKMREGLEW  120
TSTRMGRPFW EAPSRMPLSR SSSGWGDSPE KLHQECLVHT LFQRPFSCHV DGCPFSYSRK  180
DHLNRHLLTH QGKLFACPME GCNRKFTIKG NIQRHVQEMH KDGSPCESKK EFICPEENCG  240
KTFKYASKLQ KHEESHVKLD YSEVICCEPG CMKAFTNLEC LKAHNKSCHR HVVCDVCGTK  300
QLKKNFKRHQ RMHEGSCVTE RVRCHLKDCK LSFSKKSNLD KHVKAVHEQK RPFVCGFSGC  360
GKSFSYKHVR DNHEKSSAHV YVQANFEEID GERPRQAGGR KRKAIPVESL MRKRVAAPDD  420
DAPACDDGTE YLRWLLSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-90	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G01580.1