PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G02040.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 179aa    MW: 19877.2 Da    PI: 7.0156
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G02040.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY871.6e-273997259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                      D ++WrKYGqK++kgs++ r+YY+C+s  gCp++k+v+++++d ++++itY+++Hnh+
  ONIVA05G02040.1 39 ADSWSWRKYGQKPIKGSPHLRGYYKCSSYrGCPARKQVDKCRNDASLLIITYTSDHNHD 97
                     69************************9877****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MTKMSSMKAD GSVPKRRRQD VQKVVVSLKD HKVEQGPPAD SWSWRKYGQK PIKGSPHLRG  60
YYKCSSYRGC PARKQVDKCR NDASLLIITY TSDHNHDNYA ATTTNSVQEQ AHNPDTSDPL  120
SNGMSLAEVV TVASSKLSGE EESCDFFDEL EELPVSASPL PSLSFMVQEC SFSDARTLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.18e-33WRKY family protein