PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G03610.4

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CPP

Protein Properties

Length: 414aa MW: 46064.4 Da PI: 7.8944

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G03610.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	21	6.7e-07	44	67	17	41
TCR 17 YCeCfaagkkCseeCkCedCkNkee 41 YCeCfaa+++C+ C+C+ C Nk e ONIVA05G03610.4 44 YCECFAARVYCDG-CHCSPCGNKIE 67 ***********.******976 PP
2	TCR	50.8	3.3e-16	113	152	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+C+ks+ClkkYCeCf+a+ Cs++C+C+dCkN e ONIVA05G03610.4 113 KHNKGCHCRKSECLKKYCECFQANILCSKNCRCQDCKNFE 152 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MPPVRSAPVA PPPPPQQKKP AVPVSRPWPM SFTPHPPPPP PPPYCECFAA RVYCDGCHCS 60 PCGNKIENEN IRKEAIETIL LRNPLAFQPK IENSPNTVTV RKDNSEAIPP IPKHNKGCHC 120 RKSECLKKYC ECFQANILCS KNCRCQDCKN FEGSEERKAL VQMKNASDRN HIQEAANFAL 180 NGATTGSLGY KSSPVRRKKY QENSLGEQIL SEAQFQPLAS SCTGFGGDIA INYQSKSSEM 240 IYRSPLANTI PLIEVNDLVK NALVACRKAP EAFLTKAGNK VEMQAEKQYQ TNDEINNDKT 300 KEQNLKEASL KDIQNKACID RQNINGTEPH LANSFKDSRP ASPGTQALMC DEMDTTFGNE 360 DYRSPFVVPS RDQDISELNA DQERIVLTGL RDYLRVLITR GNINGECNLL TLLL

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MPPVRSAPVA PPPPPQQKKP AVPVSRPWPM SFTPHPPPPP PPPYCECFAA RVYCDGCHCS  60
PCGNKIENEN IRKEAIETIL LRNPLAFQPK IENSPNTVTV RKDNSEAIPP IPKHNKGCHC  120
RKSECLKKYC ECFQANILCS KNCRCQDCKN FEGSEERKAL VQMKNASDRN HIQEAANFAL  180
NGATTGSLGY KSSPVRRKKY QENSLGEQIL SEAQFQPLAS SCTGFGGDIA INYQSKSSEM  240
IYRSPLANTI PLIEVNDLVK NALVACRKAP EAFLTKAGNK VEMQAEKQYQ TNDEINNDKT  300
KEQNLKEASL KDIQNKACID RQNINGTEPH LANSFKDSRP ASPGTQALMC DEMDTTFGNE  360
DYRSPFVVPS RDQDISELNA DQERIVLTGL RDYLRVLITR GNINGECNLL TLLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	2e-69	CPP family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G03610.4