PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G04240.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GATA
Protein Properties Length: 133aa    MW: 14161.5 Da    PI: 8.0439
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G04240.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA27.64e-093251120
             GATA  1 CsnCgttkTplWRrgpdgnk 20
                     C+ Cg+t+Tp+WR gp g++
  ONIVA05G04240.1 32 CVECGATTTPMWRGGPTGPR 51
                     ******************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MGSSDQKVIG IAAAAAAAAA AAAAEEAGRR CCVECGATTT PMWRGGPTGP RISEIVISRS  60
ESDCEGTMEG NCVPLKRIFY YHLLGLQKAA NVLLFLVPIR VLTMENNSCD ILHIIRIIGR  120
GCGIESKTRI IDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26930.14e-08GATA family protein