PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G04390.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 84aa    MW: 9395.87 Da    PI: 10.356
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G04390.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH216.2e-071966855
                     HHHHHHHH...HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH  8 rErrRRdr...iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      ErrR++r   ++ ++e Lr+l+P     +++  s  e L +A +YI  Lq
  ONIVA05G04390.1 19 KERRRMRRcveVRRKMEALRRLVPGG---GGGEDSGEELLFRAADYIARLQ 66
                     456665543349*************9...9*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
MPPPASNHGA ACKNSGSNKE RRRMRRCVEV RRKMEALRRL VPGGGGGEDS GEELLFRAAD  60
YIARLQVQVK VMQLMVDVLE QTKD