PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G04710.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 246aa    MW: 26847.7 Da    PI: 8.6467
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G04710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.86.8e-152569147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r rW++eE+e+++da  ++G + Wk+I + +  ++t+ q++s+ qk+
  ONIVA05G04710.1 25 RERWSAEEHERFLDALILFGRD-WKRIEAFVA-TKTAIQIRSHAQKH 69
                     78******************77.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MAAMAAAAAG TKKKARKPYT ITRPRERWSA EEHERFLDAL ILFGRDWKRI EAFVATKTAI  60
QIRSHAQKHF LKARKFGLAG GLPPPLHPRR ATLLRANAAA ADMMPPPWLP SAGGGSIGCS  120
APPSGVQQSM AGRSPACYST DEASFRPLIH SNDNDCSFIE TPNCIGSGGE SWIDDDAFFM  180
QDETIRLPIS PDDLGFAQVY KFVGDMFGSG ERRPVEAHLR RLQGMDPAIS ETILLVLKNL  240
EANLSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-27MYB_related family protein