PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G07370.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MIKC_MADS

Protein Properties

Length: 481aa MW: 54476.5 Da PI: 6.9749

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G07370.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	97.3	6.5e-31	51	101	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyeys+ ONIVA05G07370.3 51 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSN 101 79***********************************************95 PP
2	SRF-TF	82.3	3e-26	307	355	3	51
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ie++ rqvtf+kR ng+lKKA+ELS LCdaeva+i+fss+g+lyeys+ ONIVA05G07370.3 307 IEDTADRQVTFCKRCNGLLKKAYELSMLCDAEVALIVFSSRGRLYEYSN 355 99*********************************************95 PP
3	K-box	103.6	2.4e-34	119	215	4	100
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 s+ + + e +a+++qqe+akLk++i nLq+ +R l+G++++s++++eL+qLe +L+k+l kiR++Knell+++ie++q++e elq++n++L++k ONIVA05G07370.3 119 SNASTVVEINAQHYQQEAAKLKQQITNLQNANRTLVGDNITSMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSK 212 3344488999************************************************************************************ PP K-box 98 lee 100 ++e ONIVA05G07370.3 213 VAE 215 986 PP
4	K-box	45.9	2.4e-16	373	465	4	98
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLsl.keLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 s+ + ++e +a+++qqe+akLk+ i Lq+++R ++ +L+ L++ +L ++ +L +l+kiR++Kne+++++ie++q++e elq++n++ ++ ONIVA05G07370.3 373 SNASTVAEINAQHYQQEAAKLKQHITYLQNSNRFII--SLSCLDFfFQLDKVV-HLVIGLEKIRARKNEYMCAEIEYMQRRETELQNDNMYSKS 463 44444999********************977765..788777524666664.5889*****************************99887 PP K-box 97 kl 98 ++ ONIVA05G07370.3 464 EM 465 76 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MHIYKEQEAE PSTGLMMPEP APVASPGSGG SGGSGSVGAE KIGSRGKIEI KRIENTTNRQ 60 VTFCKRRNGL LKKAYELSVL CDAEVALVVF SSRGRLYEYS NNSVKETIER YKKANSDTSN 120 ASTVVEINAQ HYQQEAAKLK QQITNLQNAN RTLVGDNITS MNHRELKQLE GRLDKGLGKI 180 RARKNELLCA EIEYMQRRET ELQNDNMYLK SKVAESERGL QTVNMMGSAS TSEYVQNMIH 240 YDPRNFLQFN IMHQPQYYPE QEDRKAFMSA IMHIYKEQEA EPSTGLMMPE PAPAASPGSG 300 SSEGSGIEDT ADRQVTFCKR CNGLLKKAYE LSMLCDAEVA LIVFSSRGRL YEYSNNSVEE 360 TIERYKKANS DTSNASTVAE INAQHYQQEA AKLKQHITYL QNSNRFIISL SCLDFFFQLD 420 KVVHLVIGLE KIRARKNEYM CAEIEYMQRR ETELQNDNMY SKSEMKDKYG SVSCMCFLQG 480 E

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MHIYKEQEAE PSTGLMMPEP APVASPGSGG SGGSGSVGAE KIGSRGKIEI KRIENTTNRQ  60
VTFCKRRNGL LKKAYELSVL CDAEVALVVF SSRGRLYEYS NNSVKETIER YKKANSDTSN  120
ASTVVEINAQ HYQQEAAKLK QQITNLQNAN RTLVGDNITS MNHRELKQLE GRLDKGLGKI  180
RARKNELLCA EIEYMQRRET ELQNDNMYLK SKVAESERGL QTVNMMGSAS TSEYVQNMIH  240
YDPRNFLQFN IMHQPQYYPE QEDRKAFMSA IMHIYKEQEA EPSTGLMMPE PAPAASPGSG  300
SSEGSGIEDT ADRQVTFCKR CNGLLKKAYE LSMLCDAEVA LIVFSSRGRL YEYSNNSVEE  360
TIERYKKANS DTSNASTVAE INAQHYQQEA AKLKQHITYL QNSNRFIISL SCLDFFFQLD  420
KVVHLVIGLE KIRARKNEYM CAEIEYMQRR ETELQNDNMY SKSEMKDKYG SVSCMCFLQG  480
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18960.1	9e-92	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G07370.3