PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G12010.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HB-other
Protein Properties Length: 127aa    MW: 14393.8 Da    PI: 9.5345
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G12010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.32.3e-17352857
                     -HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
         Homeobox  8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                     t++qle+L++ + ++ yp+++ r+eL+ klgLt++q ++WF+ rR k++k
  ONIVA05G12010.1  3 TPYQLEVLKRTYTEDLYPNETIRAELSVKLGLTDKQLQMWFCHRRLKDRK 52
                     89**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MKTPYQLEVL KRTYTEDLYP NETIRAELSV KLGLTDKQLQ MWFCHRRLKD RKPPPKRQQL  60
EEDVHVPVMA PPPVLPPPLP HSKLTMAPGG MYGEQLLPSS SRRGTGRPSA ILDMSDLQCL  120
PLLTSHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28420.12e-17HB-other family protein