PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G13170.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 224aa    MW: 23588.1 Da    PI: 4.4823
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G13170.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM331.7e-101282278
              NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknrat 78
                      pG + +P+d+elv  yL ++++g++l+l     e+d +++ P++L +  +++ +e +f ++++ k+a+gkr++ ++
  ONIVA05G13170.1 12 LPGPKLDPSDDELVGGYLLRRLQGQPLPL-----EADPLSARPRNLAAD-HGRGDEAFFLAEAQAKNAKGKRQRSTV 82
                     7999**********************999.....79**********844.456679999999999999999887654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MAAAAAGADG LLPGPKLDPS DDELVGGYLL RRLQGQPLPL EADPLSARPR NLAADHGRGD  60
EAFFLAEAQA KNAKGKRQRS TVEGQSIAGC VDYGGAGFAI ALLRGKAKGS AEGPAVEASQ  120
RDLRLQRQRA GCRPDSTWCG KEVCAQQDED WISTRADTCS FMLVLPSMVP LFLHRDEAGD  180
EQGDAPVEVT HGDEQGEGGN PNSSGSIVLE HEGATDQDEA RAIV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17479KGKRQR