PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G15390.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family AP2
Protein Properties Length: 445aa    MW: 48769.8 Da    PI: 8.5589
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G15390.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.47.1e-13128184155
              AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                      s y+GV++++++gr++A+++d  ++n+ ++k+   g ++ +e Aa+a++ a++k++g
  ONIVA05G15390.2 128 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 184
                      57*******************6666777775555599******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    
MRSPPFEIPP LSSPRPPPPN GHPRFGSLFS SRLASPPTPI EASPGPAAGM QQKLEAAAAA  60
AGGGDGAEWS RGMQKMEAVG AGGEGVGAGA EQVAPPPRRP VAARKERVCT AKERISRMPP  120
CAAGKRSSIY RGVTRHRWTG RYEAHLWDKS TWNQNQNKKG KQGAYDDEEA AARAYDLAAL  180
KYWGAGTQIN FPVSDYARDL EEMQMISKED YLVSLRRQLH NSRWDASLGH LLGNDYMSLG  240
KDITLDGKFA GTFGLERKID LTNYIRWWLP KKTRQSDTSK MEEVTDEIRA IESSMQRTEP  300
YKFPSLGLHS NSKPSSVVLS ACDILSQSDA FKSFSEKSTK LSEECTFSKE MDEGKTVTPV  360
PATGHDTTAV NMNVNGLLVQ RAPYTLPSVT AQMKNTWNPA DPSADPLFWT NFILPASQPV  420
TMATIATTTF AKNEVSSSDP FHGQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.13e-87AP2 family protein