PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G19090.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB

Protein Properties

Length: 171aa MW: 19225.5 Da PI: 9.9272

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G19090.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.8	1e-07	15	61	3	47
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 +W++ Ed+ + a ++ + +W+ +a++++ gR++ ++ ++++ + ONIVA05G19090.2 15 PWSKAEDKVFESALVAFPEHthnRWAIVASRLP-GRSAHEVWEHYRVL 61 8*************9999999******.*********976 PP
2	Myb_DNA-binding	45.4	1.8e-14	103	147	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++++ +++G g+W+ I+r k+Rt+ q+ s+ qk+ ONIVA05G19090.2 103 PWTEEEHRLFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKF 147 8******************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MAFYLGSMGG SPSRPWSKAE DKVFESALVA FPEHTHNRWA IVASRLPGRS AHEVWEHYRV 60 LVDDVDLIER GMVASPGCWD DGAGRGGAQG ASRGGDERRR GVPWTEEEHR LFLEGLEKYG 120 RGDWRNISRW SVKTRTPTQV ASHAQKFFIR QANAGNRSDS KRKSIHDIIA P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	3e-45	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G19090.2