PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G20210.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 206aa MW: 21673.5 Da PI: 9.8152

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G20210.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	41	63	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C Cg++F++ L H +H ONIVA05G20210.1 41 FECRTCGRRFPTFQALGDHRASH 63 89**************9999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MSKRQFGEMD GGIDTARVLM LLSRRRQQHG DVGHARAARV FECRTCGRRF PTFQALGDHR 60 ASHKRPRHGA ERAPRPAGDD DVGAGAGAAL RLVGAASSLS TDEARAGGGG RRTRGAGAAH 120 GCPVCGLEFA VGQALGGHMR RHRAAAGDVA APRVKTDDVV VGDECTGGIC LDLNLTPSEN 180 CDKCRHAQLG VAVNSVQRTI LLDRPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	1e-21	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G20210.1