PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G23180.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CPP

Protein Properties

Length: 385aa MW: 42529.4 Da PI: 8.148

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G23180.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.8	5e-14	85	122	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+C Ckks+Clk+YC Cfa g +Cse+C C+ C+Nk ONIVA05G23180.1 85 CKHCACKKSRCLKLYCPCFAGGGYCSEKCGCQPCFNKA 122 89**********************************85 PP
2	TCR	49.9	6.2e-16	181	217	3	39
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++gCnCkks+ClkkYC+C+++g+ Cs C+CedC+N ONIVA05G23180.1 181 RRGCNCKKSSCLKKYCDCYQDGTGCSLFCRCEDCRNP 217 589********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MEATPISVKP PSPVAAAPPP PPVQVPVPPP PPPPLPPAAA AVEPLPPQPV AVVVAEAEPC 60 SMNQLALTPT PKRQKVEESA DGNGCKHCAC KKSRCLKLYC PCFAGGGYCS EKCGCQPCFN 120 KALYAETVQT TRKVLLSRQK RMSLKINRRS EANAEAVVVF LTEKAGATED AHHSSSSTPP 180 RRGCNCKKSS CLKKYCDCYQ DGTGCSLFCR CEDCRNPFGK NEGIMAEESK RFLYTGADLD 240 HSEDEQDFIV ERSPRLQSPI SKESSFQQTP PHIRATNRDT HMFPQAISQW QPRSWHCSKR 300 QSNDRVIDDS GEYKNSNHDW QLAKPEDSYS ISRCVQILNG MAELSQVEKS VAPDVFLQAG 360 NREIFISLNG DVRALWLKRK IQNLT

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MEATPISVKP PSPVAAAPPP PPVQVPVPPP PPPPLPPAAA AVEPLPPQPV AVVVAEAEPC  60
SMNQLALTPT PKRQKVEESA DGNGCKHCAC KKSRCLKLYC PCFAGGGYCS EKCGCQPCFN  120
KALYAETVQT TRKVLLSRQK RMSLKINRRS EANAEAVVVF LTEKAGATED AHHSSSSTPP  180
RRGCNCKKSS CLKKYCDCYQ DGTGCSLFCR CEDCRNPFGK NEGIMAEESK RFLYTGADLD  240
HSEDEQDFIV ERSPRLQSPI SKESSFQQTP PHIRATNRDT HMFPQAISQW QPRSWHCSKR  300
QSNDRVIDDS GEYKNSNHDW QLAKPEDSYS ISRCVQILNG MAELSQVEKS VAPDVFLQAG  360
NREIFISLNG DVRALWLKRK IQNLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22760.1	1e-42	CPP family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G23180.1