PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G29740.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 266aa    MW: 28040 Da    PI: 8.6054
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G29740.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.21.9e-13116160347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +W+++E+ l++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qk+
  ONIVA05G29740.1 116 PWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKF 160
                      8******************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MARRCSGDYS TAGQRAGEEG GGGGGAGLRL FGVQLHAAAA SSPASYLHKS YSMDCLRLQV  60
SSPSSLQSSS SSPSPLTSSL LLSIDEGCER PAADGYLSDG PHGAAATMRE RKKGVPWSEQ  120
EHRLFLAGLE KLGKGDWRGI SRSFVTTRTP TQVASHAQKF FLRHNSAAKK TNNKRRSSLF  180
DMVQDCDSGG RSLASSDPAT RCNNNISASL SLQVSHHKSG DSAWPSSETP SVSEAQQGHG  240
YGTSHHCSPL DLELGMSLST TPSIGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.12e-38MYB_related family protein