PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G00500.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 203aa    MW: 21971 Da    PI: 9.99
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G00500.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B379.53.4e-2537142197
                      EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS......-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesg......rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 
                      f+kv tpsdv+k++rlv+pk++ae++         ++ ++ l +ed +g       +W+++++y+ +s++yv+tkGW+++v++++L +gD+v F
  ONIVA06G00500.1  37 FEKVVTPSDVGKLNRLVVPKHYAEKYfplgpvARTSPAGTVLCFEDARGgggggdSTWRFRYSYWSSSQSYVITKGWSRYVRDKRLAAGDTVSF 130
                      99***************************999555557789*****9999******************************************** PP

                      EE-SSSEE..EEEEE CS
               B3  83 kldgrsefelvvkvf 97 
                          r +++l++  +
  ONIVA06G00500.1 131 C---RAGARLFIDCR 142
                      9...44555666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MATIVAWESR NLQLQRGGGG HGGGGGSGGG ERREYMFEKV VTPSDVGKLN RLVVPKHYAE  60
KYFPLGPVAR TSPAGTVLCF EDARGGGGGG DSTWRFRYSY WSSSQSYVIT KGWSRYVRDK  120
RLAAGDTVSF CRAGARLFID CRKRAASVSS SSLVPPALIK VQLPPSRPVV DEEEAACGRR  180
CLRLFGVDLQ LRADASPALD LQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61970.16e-41B3 family protein